Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 AC018665.1-201ENST00000622927 1362 ntBASIC20.37■□□□□ 0.85
KCNQ3O43525 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.37■□□□□ 0.85
KCNQ3O43525 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ3O43525 MIR648-201ENST00000385046 94 ntBASIC20.37■□□□□ 0.85
KCNQ3O43525 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNQ3O43525 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.37■□□□□ 0.85
KCNQ3O43525 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ3O43525 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ3O43525 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNQ3O43525 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KCNQ3O43525 AL049840.4-201ENST00000602422 811 ntBASIC20.37■□□□□ 0.85
KCNQ3O43525 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ3O43525 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 AL121723.1-201ENST00000445194 1519 ntBASIC20.37■□□□□ 0.85
KCNQ3O43525 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ3O43525 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNQ3O43525 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
KCNQ3O43525 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNQ3O43525 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 CLUHP6-201ENST00000580789 941 ntBASIC20.36■□□□□ 0.85
KCNQ3O43525 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNQ3O43525 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNQ3O43525 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ3O43525 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ3O43525 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
KCNQ3O43525 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ3O43525 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
KCNQ3O43525 ACTG1P3-201ENST00000431775 1114 ntBASIC20.35■□□□□ 0.85
KCNQ3O43525 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ3O43525 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ3O43525 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 AC015936.2-201ENST00000593177 259 ntBASIC20.35■□□□□ 0.85
KCNQ3O43525 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KCNQ3O43525 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KCNQ3O43525 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ3O43525 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KCNQ3O43525 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNQ3O43525 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ3O43525 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms