Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HIP1O00291 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HIP1O00291 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.29■□□□□ 0.68
HIP1O00291 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIP1O00291 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.28■□□□□ 0.68
HIP1O00291 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.28■□□□□ 0.68
HIP1O00291 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.28■□□□□ 0.68
HIP1O00291 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 MTND6P24-201ENST00000440466 518 ntBASIC19.28■□□□□ 0.68
HIP1O00291 CNN2P2-201ENST00000443536 909 ntBASIC19.28■□□□□ 0.68
HIP1O00291 CNN2P3-201ENST00000450201 906 ntBASIC19.28■□□□□ 0.68
HIP1O00291 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.28■□□□□ 0.68
HIP1O00291 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 AC025678.2-201ENST00000562061 970 ntBASIC19.28■□□□□ 0.68
HIP1O00291 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.28■□□□□ 0.68
HIP1O00291 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 AL136317.3-201ENST00000618497 906 ntBASIC19.28■□□□□ 0.68
HIP1O00291 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.28■□□□□ 0.68
HIP1O00291 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.28■□□□□ 0.68
HIP1O00291 FER1L4-210ENST00000615531 5998 ntBASIC19.28■□□□□ 0.68
HIP1O00291 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 KRT8P12-202ENST00000472924 1397 ntBASIC19.28■□□□□ 0.68
HIP1O00291 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIP1O00291 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.28■□□□□ 0.68
HIP1O00291 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HIP1O00291 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.27■□□□□ 0.68
HIP1O00291 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HIP1O00291 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 PRAL-201ENST00000624952 3286 ntBASIC19.27■□□□□ 0.68
HIP1O00291 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.27■□□□□ 0.68
HIP1O00291 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.27■□□□□ 0.68
HIP1O00291 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 AL139400.1-201ENST00000366220 510 ntBASIC19.27■□□□□ 0.68
HIP1O00291 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.27■□□□□ 0.68
HIP1O00291 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
HIP1O00291 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.27■□□□□ 0.68
HIP1O00291 AC015911.4-201ENST00000588022 1070 ntBASIC19.27■□□□□ 0.68
HIP1O00291 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.27■□□□□ 0.68
HIP1O00291 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HIP1O00291 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIP1O00291 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.27■□□□□ 0.67
HIP1O00291 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.27■□□□□ 0.67
HIP1O00291 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HIP1O00291 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIP1O00291 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
HIP1O00291 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIP1O00291 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIP1O00291 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
HIP1O00291 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.27■□□□□ 0.67
HIP1O00291 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
HIP1O00291 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIP1O00291 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HIP1O00291 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HIP1O00291 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.26■□□□□ 0.67
HIP1O00291 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIP1O00291 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.26■□□□□ 0.67
HIP1O00291 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms