Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 YBX2P1-201ENST00000394192 760 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3B1O00203 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AP3B1O00203 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.24■□□□□ 0.19
AP3B1O00203 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.24■□□□□ 0.19
AP3B1O00203 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3B1O00203 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.24■□□□□ 0.19
AP3B1O00203 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3B1O00203 AC243562.1-201ENST00000560672 389 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3B1O00203 AL121894.2-201ENST00000602977 491 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 AC084121.4-201ENST00000641598 221 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 AF228730.8-201ENST00000642140 221 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
AP3B1O00203 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3B1O00203 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3B1O00203 TMBIM7P-203ENST00000641617 1718 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 PRAL-201ENST00000624952 3286 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3B1O00203 AC023274.1-201ENST00000418278 595 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 RPS8P6-201ENST00000426177 609 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.23■□□□□ 0.19
AP3B1O00203 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3B1O00203 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 AC104640.1-201ENST00000562617 2109 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.23■□□□□ 0.19
AP3B1O00203 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 AC055717.3-201ENST00000622967 595 ntBASIC16.23■□□□□ 0.19
AP3B1O00203 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3B1O00203 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3B1O00203 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3B1O00203 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3B1O00203 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3B1O00203 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.22■□□□□ 0.19
AP3B1O00203 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 SPCS2P4-201ENST00000436160 681 ntBASIC16.22■□□□□ 0.19
AP3B1O00203 AC079140.1-201ENST00000508039 487 ntBASIC16.22■□□□□ 0.19
AP3B1O00203 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.22■□□□□ 0.19
AP3B1O00203 LINC01225-203ENST00000563550 1244 ntBASIC16.22■□□□□ 0.19
AP3B1O00203 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.22■□□□□ 0.19
AP3B1O00203 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
AP3B1O00203 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
AP3B1O00203 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms