Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AL133215.2-201ENST00000609242 977 ntBASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AC012645.4-201ENST00000610691 1061 ntBASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AL139384.1-201ENST00000612143 3047 ntBASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC006449.5-201ENST00000610658 2098 ntBASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC009477.1-201ENST00000452936 217 ntBASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC005225.4-201ENST00000557330 545 ntBASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC063926.2-201ENST00000623766 1308 ntBASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA2E9PIF3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms