Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 AC103564.2-201ENST00000432853 1299 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 PRYP5-201ENST00000451909 266 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 KRT19P2-202ENST00000557173 1012 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 AC084346.2-201ENST00000607097 949 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 AC091812.2-201ENST00000619081 385 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 FER1L4-210ENST00000615531 5998 ntBASIC16.69■□□□□ 0.26
SRRM3A6NNA2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM3A6NNA2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AC055876.3-201ENST00000431496 288 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AC138649.4-201ENST00000612222 287 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 MIR6799-201ENST00000620297 69 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AC004790.2-201ENST00000623588 572 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 AL358472.5-202ENST00000641448 1267 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 LINC00528-201ENST00000600723 2160 ntBASIC16.68■□□□□ 0.26
SRRM3A6NNA2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SRRM3A6NNA2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 ELK2BP-201ENST00000415014 1224 ntBASIC16.67■□□□□ 0.26
SRRM3A6NNA2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AC074386.1-202ENST00000463561 864 ntBASIC16.67■□□□□ 0.26
SRRM3A6NNA2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AC022145.2-201ENST00000598203 171 ntBASIC16.67■□□□□ 0.26
SRRM3A6NNA2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AC073592.4-201ENST00000623827 446 ntBASIC16.67■□□□□ 0.26
SRRM3A6NNA2 AC008761.3-201ENST00000624803 892 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms