Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SPDYE10P-202ENST00000612005 668 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SPDYE8P-202ENST00000612377 668 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AC067930.6-201ENST00000623257 4947 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AC144831.1-201ENST00000573312 2656 ntBASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AC243562.1-201ENST00000560672 389 ntBASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 C20orf181-201ENST00000623918 480 ntBASIC16.31■□□□□ 0.2
CCDC78A2IDD5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCDC78A2IDD5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC134407.2-201ENST00000625089 1978 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 SPCS2P4-201ENST00000436160 681 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC079140.1-201ENST00000508039 487 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC010327.4-202ENST00000591484 748 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 MTDHP5-201ENST00000598980 586 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 AC026120.1-201ENST00000611536 926 ntBASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms