Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 BRWD1P1-201ENST00000401091 371 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 TOMM22P5-201ENST00000416399 439 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 AC099336.1-201ENST00000417053 1171 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 FO681548.1-201ENST00000455617 1132 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 RNA5SP412-201ENST00000516234 123 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 INTS4P2-202ENST00000614726 2019 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AC074338.1-201ENST00000416825 156 ntBASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 RPL7P3-201ENST00000441388 714 ntBASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC187A0A096LP49 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms