Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 AL136982.4-201ENST00000437689 1740 ntBASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1G3Q9Y6M4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 AC123567.1-201ENST00000548294 1261 ntBASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 WASH4P-201ENST00000564273 1246 ntBASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1G3Q9Y6M4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms