Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 AC018892.3-201ENST00000623986 2499 ntBASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA3Q9Y5H8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA3Q9Y5H8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHA3Q9Y5H8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 MIR4313-201ENST00000580760 101 ntBASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA3Q9Y5H8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms