Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC092506.1-202ENST00000401022 528 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 TTTY23B-201ENST00000442790 549 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC022210.1-201ENST00000449856 793 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC007389.4-201ENST00000454674 793 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC124283.3-201ENST00000570869 594 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 BCYRN1-201ENST00000418539 200 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AL162726.2-201ENST00000438986 1017 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 RPL13AP25-201ENST00000484130 612 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 RAB43P1-201ENST00000561790 589 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC015936.2-201ENST00000593177 259 ntBASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.74■■□□□ 1.07
NINLQ9Y2I6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 INTS4P2-202ENST00000614726 2019 ntBASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 KRT17P8-201ENST00000540749 863 ntBASIC21.73■■□□□ 1.07
NINLQ9Y2I6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms