Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 NME2P1-201ENST00000426182 414 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 RN7SL692P-201ENST00000464677 288 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AL079307.3-201ENST00000556114 283 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AL596325.1-201ENST00000563991 1082 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AC024909.3-201ENST00000611513 2257 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 PCDHA1-201ENST00000378133 2726 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AC098614.1-201ENST00000368528 745 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AC087499.6-201ENST00000411576 835 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 KRT17P7-201ENST00000451704 1104 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 CROCCP1-201ENST00000426910 5675 ntBASIC14.35□□□□□ -0.11
FOXD3Q9UJU5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXD3Q9UJU5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms