Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 KRT18P24-201ENST00000344739 1156 ntBASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 HYI-210ENST00000486909 905 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AC010525.1-201ENST00000585559 441 ntBASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 KRT8P50-201ENST00000562022 1438 ntBASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 ZBTB45P2-201ENST00000452245 1531 ntBASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 DDX43P3-201ENST00000441064 443 ntBASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 AL033527.3-201ENST00000566366 1196 ntBASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms