Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 OR2I1P-209ENST00000641730 5365 ntBASIC19.13■□□□□ 0.65
RTN4Q9NQC3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 BX664615.1-201ENST00000443558 458 ntBASIC19.13■□□□□ 0.65
RTN4Q9NQC3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 AL390719.2-201ENST00000606993 987 ntBASIC19.13■□□□□ 0.65
RTN4Q9NQC3 AC019129.2-201ENST00000609837 1235 ntBASIC19.13■□□□□ 0.65
RTN4Q9NQC3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTN4Q9NQC3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AC019294.4-201ENST00000561777 2905 ntBASIC19.12■□□□□ 0.65
RTN4Q9NQC3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AL391256.1-201ENST00000443260 1855 ntBASIC19.12■□□□□ 0.65
RTN4Q9NQC3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 KRT18P38-201ENST00000449496 1282 ntBASIC19.12■□□□□ 0.65
RTN4Q9NQC3 RN7SKP64-201ENST00000517206 328 ntBASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AC026979.3-201ENST00000607315 403 ntBASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.12■□□□□ 0.65
RTN4Q9NQC3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 AC117947.1-201ENST00000427448 529 ntBASIC19.11■□□□□ 0.65
RTN4Q9NQC3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms