Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GCM1Q9NP62 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GCM1Q9NP62 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GCM1Q9NP62 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.78□□□□□ -0.2
GCM1Q9NP62 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GCM1Q9NP62 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GCM1Q9NP62 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
GCM1Q9NP62 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GCM1Q9NP62 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GCM1Q9NP62 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GCM1Q9NP62 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 SPDYE7P-202ENST00000420373 878 ntBASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 PMS2P2-201ENST00000425039 1128 ntBASIC13.77□□□□□ -0.21
GCM1Q9NP62 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC069262.1-201ENST00000539058 672 ntBASIC13.77□□□□□ -0.21
GCM1Q9NP62 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC018529.1-201ENST00000613063 361 ntBASIC13.77□□□□□ -0.21
GCM1Q9NP62 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GCM1Q9NP62 CICP6-201ENST00000457191 2729 ntBASIC13.77□□□□□ -0.21
GCM1Q9NP62 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.77□□□□□ -0.21
GCM1Q9NP62 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AC061975.2-201ENST00000581722 295 ntBASIC13.76□□□□□ -0.21
GCM1Q9NP62 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 MIR6080-201ENST00000617359 66 ntBASIC13.76□□□□□ -0.21
GCM1Q9NP62 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms