Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP13A1Q9HD20 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 AP001282.1-201ENST00000531301 1499 ntBASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 AC112504.1-201ENST00000623415 1841 ntBASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 KRT8P12-202ENST00000472924 1397 ntBASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 SPDYE17-201ENST00000412399 783 ntBASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP13A1Q9HD20 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 AC134407.2-201ENST00000625089 1978 ntBASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 FER1L4-210ENST00000615531 5998 ntBASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 INGX-202ENST00000489074 768 ntBASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 LINC02447-202ENST00000501888 2146 ntBASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP13A1Q9HD20 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP13A1Q9HD20 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms