Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF2Q9HAU5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF2Q9HAU5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AC025062.2-201ENST00000605477 670 ntBASIC19.78■□□□□ 0.76
UPF2Q9HAU5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF2Q9HAU5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 KRT18P21-201ENST00000515767 1272 ntBASIC19.77■□□□□ 0.76
UPF2Q9HAU5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.77■□□□□ 0.76
UPF2Q9HAU5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPF2Q9HAU5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AC245100.5-201ENST00000452108 331 ntBASIC19.76■□□□□ 0.75
UPF2Q9HAU5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AC107918.4-202ENST00000641623 219 ntBASIC19.76■□□□□ 0.75
UPF2Q9HAU5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms