Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 ELL2P1-201ENST00000413990 1906 ntBASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 HYMAI-201ENST00000635591 3347 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AC104640.1-201ENST00000562617 2109 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AC005829.1-201ENST00000570002 483 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 UXT-AS1-201ENST00000590504 1525 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AL691432.1-201ENST00000596308 1422 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AP003680.1-201ENST00000598970 3660 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AC084121.4-201ENST00000641598 221 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 AF228730.8-201ENST00000642140 221 ntBASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC40Q9H9A6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 CEND1P1-201ENST00000451006 455 ntBASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 AC069335.1-201ENST00000489972 472 ntBASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 AC022532.1-201ENST00000624563 1728 ntBASIC16.31■□□□□ 0.2
LRRC40Q9H9A6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 AC126177.1-201ENST00000547829 2218 ntBASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms