Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 TP53TG3HP-202ENST00000569755 579 ntBASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 AL033527.4-201ENST00000641026 673 ntBASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 BCL2-203ENST00000589955 5011 ntBASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 REXO1L6P-201ENST00000603433 1515 ntBASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 FAM45BP-202ENST00000592932 1624 ntBASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCAF1Q9H7N4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 BCYRN1-201ENST00000418539 200 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 MTND2P11-201ENST00000423638 648 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 SPTLC1P1-201ENST00000447199 261 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 RAB43P1-201ENST00000561790 589 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 AL162274.1-201ENST00000617191 1098 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 AC116353.5-201ENST00000638148 1699 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCAF1Q9H7N4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 SPCS2P4-201ENST00000436160 681 ntBASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 AC093534.1-201ENST00000504977 132 ntBASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 AL357094.1-201ENST00000603845 844 ntBASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 ACTL9-202ENST00000612068 1252 ntBASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC24.16■■□□□ 1.46
SCAF1Q9H7N4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 AC027369.6-201ENST00000525520 931 ntBASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCAF1Q9H7N4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 MTCO1P15-201ENST00000529569 1526 ntBASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms