Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AL596442.2-201ENST00000610240 980 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 MIR6080-201ENST00000617359 66 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 KRT8P12-202ENST00000472924 1397 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 AC136604.1-201ENST00000418535 575 ntBASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 LINC00628-201ENST00000628516 1289 ntBASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.9■□□□□ 0.46
CCSER1Q9C0I3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCSER1Q9C0I3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AL139400.1-201ENST00000366220 510 ntBASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AC109322.1-201ENST00000524499 1264 ntBASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
CCSER1Q9C0I3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 SSR4P1-203ENST00000599569 2260 ntBASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSER1Q9C0I3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms