Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHACTR1Q9C0D0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AC126365.1-201ENST00000578585 1514 ntBASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AC092910.1-201ENST00000482027 1129 ntBASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 MIR7706-201ENST00000613747 67 ntBASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PHACTR1Q9C0D0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 KRT8P44-201ENST00000441609 1350 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AC098831.1-202ENST00000438821 336 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AL161645.1-201ENST00000622716 1255 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 AC148477.8-201ENST00000624298 468 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms