Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM2Q9C040 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM2Q9C040 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM2Q9C040 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.83□□□□□ -0.03
TRIM2Q9C040 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM2Q9C040 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC132872.4-202ENST00000622924 2756 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 RPS8P6-201ENST00000426177 609 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC098859.1-201ENST00000502915 1238 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC005829.1-201ENST00000570002 483 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC073389.1-201ENST00000595595 795 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC099522.2-201ENST00000607001 744 ntBASIC14.83□□□□□ -0.04
TRIM2Q9C040 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM2Q9C040 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM2Q9C040 AP001282.1-201ENST00000531301 1499 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC011477.6-201ENST00000604980 1927 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC211486.1-202ENST00000416371 468 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC211476.1-201ENST00000503899 468 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 YBX1P5-201ENST00000509441 847 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC105233.2-201ENST00000523697 349 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 AF228730.5-201ENST00000530288 346 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC024267.1-201ENST00000582320 895 ntBASIC14.82□□□□□ -0.04
TRIM2Q9C040 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM2Q9C040 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM2Q9C040 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms