Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 AL355306.1-201ENST00000415580 579 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 LINC00554-201ENST00000564841 3011 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 AP005117.1-202ENST00000581724 1908 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 KRT18P28-201ENST00000453838 1332 ntBASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
YIPF4Q9BSR8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 HMGN1P19-201ENST00000436976 333 ntBASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AP006288.1-201ENST00000446065 395 ntBASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 MIR4469-201ENST00000583919 79 ntBASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AC027307.2-201ENST00000591252 911 ntBASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
YIPF4Q9BSR8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms