Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC125807.1-201ENST00000483097 614 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.47□□□□□ -0.25
CCL13Q99616 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.47□□□□□ -0.25
CCL13Q99616 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL13Q99616 RN7SL828P-201ENST00000607615 303 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 TNRC18P3-201ENST00000441896 2691 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 AC024909.3-201ENST00000611513 2257 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 AL136982.4-201ENST00000437689 1740 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCL13Q99616 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CCL13Q99616 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CCL13Q99616 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CCL13Q99616 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.46□□□□□ -0.25
CCL13Q99616 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 KLF2P3-201ENST00000451977 1087 ntBASIC13.46□□□□□ -0.25
CCL13Q99616 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.46□□□□□ -0.25
CCL13Q99616 BANF1P1-201ENST00000553684 263 ntBASIC13.46□□□□□ -0.25
CCL13Q99616 AC243562.2-201ENST00000561247 970 ntBASIC13.46□□□□□ -0.25
CCL13Q99616 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.46□□□□□ -0.25
CCL13Q99616 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
CCL13Q99616 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL13Q99616 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL13Q99616 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL13Q99616 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CCL13Q99616 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL13Q99616 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL13Q99616 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CCL13Q99616 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL13Q99616 AL691432.1-201ENST00000596308 1422 ntBASIC13.46□□□□□ -0.26
CCL13Q99616 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL13Q99616 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL13Q99616 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.46□□□□□ -0.26
CCL13Q99616 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL13Q99616 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.46□□□□□ -0.26
CCL13Q99616 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 AL035456.1-201ENST00000456064 1369 ntBASIC13.45□□□□□ -0.26
CCL13Q99616 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
CCL13Q99616 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
CCL13Q99616 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL13Q99616 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CCL13Q99616 AC134407.2-201ENST00000625089 1978 ntBASIC13.45□□□□□ -0.26
CCL13Q99616 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CCL13Q99616 AC010491.1-201ENST00000563101 2797 ntBASIC13.45□□□□□ -0.26
CCL13Q99616 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL13Q99616 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL13Q99616 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CCL13Q99616 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms