Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL512356.2-201ENST00000546955 174 ntBASIC16.62■□□□□ 0.25
IFT43Q96FT9 AC093520.2-201ENST00000561830 333 ntBASIC16.62■□□□□ 0.25
IFT43Q96FT9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 AC092364.2-202ENST00000597012 1073 ntBASIC16.62■□□□□ 0.25
IFT43Q96FT9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 U82695.1-201ENST00000635752 1889 ntBASIC16.62■□□□□ 0.25
IFT43Q96FT9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT43Q96FT9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT43Q96FT9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 FAM86GP-201ENST00000448322 971 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC069335.1-201ENST00000489972 472 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 PRYP6-201ENST00000514804 343 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 KRT8P23-201ENST00000560090 1207 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC243562.1-201ENST00000560672 389 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AL135744.1-201ENST00000565098 629 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC079416.2-201ENST00000625035 1193 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AC006449.6-201ENST00000612330 2296 ntBASIC16.61■□□□□ 0.25
IFT43Q96FT9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT43Q96FT9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
IFT43Q96FT9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 AC073439.1-201ENST00000624121 1774 ntBASIC16.6■□□□□ 0.25
IFT43Q96FT9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 FAM8A3P-201ENST00000427218 844 ntBASIC16.6■□□□□ 0.25
IFT43Q96FT9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms