Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHC3Q92529 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 AC003101.2-201ENST00000612557 442 ntBASIC17.08■□□□□ 0.32
SHC3Q92529 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.08■□□□□ 0.32
SHC3Q92529 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SHC3Q92529 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 SSR4P1-203ENST00000599569 2260 ntBASIC17.08■□□□□ 0.32
SHC3Q92529 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 AC126177.1-201ENST00000547829 2218 ntBASIC17.08■□□□□ 0.32
SHC3Q92529 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC3Q92529 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHC3Q92529 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 AC092127.1-201ENST00000567093 3455 ntBASIC17.07■□□□□ 0.32
SHC3Q92529 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC3Q92529 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SHC3Q92529 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 AZGP1P1-201ENST00000411909 902 ntBASIC17.07■□□□□ 0.32
SHC3Q92529 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.07■□□□□ 0.32
SHC3Q92529 HNRNPUP1-201ENST00000554987 333 ntBASIC17.07■□□□□ 0.32
SHC3Q92529 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.07■□□□□ 0.32
SHC3Q92529 AC104640.1-201ENST00000562617 2109 ntBASIC17.07■□□□□ 0.32
SHC3Q92529 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 AC097359.3-201ENST00000603982 1210 ntBASIC17.07■□□□□ 0.32
SHC3Q92529 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC3Q92529 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC3Q92529 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC3Q92529 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.06■□□□□ 0.32
SHC3Q92529 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 AL035456.1-201ENST00000456064 1369 ntBASIC17.06■□□□□ 0.32
SHC3Q92529 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHC3Q92529 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SHC3Q92529 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC3Q92529 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SHC3Q92529 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 HIST3H2BA-201ENST00000436555 524 ntBASIC17.06■□□□□ 0.32
SHC3Q92529 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC3Q92529 DNAJB3-202ENST00000449667 1266 ntBASIC17.06■□□□□ 0.32
SHC3Q92529 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC3Q92529 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SHC3Q92529 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC3Q92529 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms