Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.07■□□□□ 0.32
DDX1Q92499 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.07■□□□□ 0.32
DDX1Q92499 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.07■□□□□ 0.32
DDX1Q92499 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.07■□□□□ 0.32
DDX1Q92499 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.07■□□□□ 0.32
DDX1Q92499 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
DDX1Q92499 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DDX1Q92499 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
DDX1Q92499 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX1Q92499 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 CICP13-201ENST00000422015 2789 ntBASIC17.06■□□□□ 0.32
DDX1Q92499 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.06■□□□□ 0.32
DDX1Q92499 AC092850.2-201ENST00000623821 2697 ntBASIC17.06■□□□□ 0.32
DDX1Q92499 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX1Q92499 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX1Q92499 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX1Q92499 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
DDX1Q92499 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 AL139010.1-201ENST00000454878 894 ntBASIC17.06■□□□□ 0.32
DDX1Q92499 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX1Q92499 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX1Q92499 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX1Q92499 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DDX1Q92499 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DDX1Q92499 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
DDX1Q92499 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX1Q92499 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX1Q92499 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 KRT18P32-201ENST00000424695 1287 ntBASIC17.05■□□□□ 0.32
DDX1Q92499 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 SPDYE14P-201ENST00000442619 822 ntBASIC17.05■□□□□ 0.32
DDX1Q92499 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 MIR4313-201ENST00000580760 101 ntBASIC17.05■□□□□ 0.32
DDX1Q92499 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX1Q92499 AC008761.3-201ENST00000624803 892 ntBASIC17.05■□□□□ 0.32
DDX1Q92499 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.05■□□□□ 0.32
DDX1Q92499 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX1Q92499 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.05■□□□□ 0.32
DDX1Q92499 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
DDX1Q92499 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX1Q92499 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DDX1Q92499 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX1Q92499 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX1Q92499 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX1Q92499 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX1Q92499 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX1Q92499 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX1Q92499 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX1Q92499 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX1Q92499 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX1Q92499 AC020658.6-201ENST00000623564 1870 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms