Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AL022342.1-201ENST00000400363 863 ntBASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 TFAMP1-201ENST00000412727 736 ntBASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 RN7SL589P-201ENST00000481268 310 ntBASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AL138918.1-201ENST00000568306 659 ntBASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 AC008677.1-201ENST00000519230 1561 ntBASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP1Q8TDR0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AL365209.1-201ENST00000624418 6473 ntBASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AC098859.1-201ENST00000502915 1238 ntBASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 POLD2P1-201ENST00000511220 997 ntBASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AC024267.1-201ENST00000582320 895 ntBASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AC073389.1-201ENST00000595595 795 ntBASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms