Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 AC135983.4-201ENST00000564116 1262 ntBASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 AC068587.8-201ENST00000641239 219 ntBASIC20.86■□□□□ 0.93
COL22A1Q8NFW1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 KRT8P29-201ENST00000420409 1371 ntBASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 LRRC59-203ENST00000576448 1531 ntBASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AC125604.1-201ENST00000496255 707 ntBASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL22A1Q8NFW1 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 AL160314.3-201ENST00000556041 767 ntBASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 AC020922.3-201ENST00000595064 547 ntBASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL22A1Q8NFW1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 AC026316.1-201ENST00000398900 414 ntBASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 MIR4754-201ENST00000582477 89 ntBASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.83■□□□□ 0.93
COL22A1Q8NFW1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.83■□□□□ 0.92
COL22A1Q8NFW1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL22A1Q8NFW1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL22A1Q8NFW1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 ISCA2P1-201ENST00000425548 448 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 AC242376.1-201ENST00000559033 726 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms