Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL008721.1-201ENST00000609964 604 ntBASIC5.01□□□□□ -1.61
SYNE1Q8NF91 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 AL353779.1-201ENST00000434793 351 ntBASIC5.01□□□□□ -1.61
SYNE1Q8NF91 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 MTRF1LP2-201ENST00000506027 1122 ntBASIC5.01□□□□□ -1.61
SYNE1Q8NF91 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 API5-211ENST00000534695 560 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 AC104794.3-201ENST00000566840 1248 ntBASIC5.01□□□□□ -1.61
SYNE1Q8NF91 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 AC073389.1-201ENST00000595595 795 ntBASIC5.01□□□□□ -1.61
SYNE1Q8NF91 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE1Q8NF91 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC5□□□□□ -1.61
SYNE1Q8NF91 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC5□□□□□ -1.61
SYNE1Q8NF91 SRP9-204ENST00000619790 377 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 IGHV3-72-202ENST00000621503 303 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 AC073439.1-201ENST00000624121 1774 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 AC117489.1-201ENST00000625169 3217 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 AC106886.4-201ENST00000623557 2502 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 AC140658.5-201ENST00000438532 169 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC5□□□□□ -1.61
SYNE1Q8NF91 COQ4-205ENST00000609948 956 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SYNE1Q8NF91 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC5□□□□□ -1.61
SYNE1Q8NF91 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC5□□□□□ -1.61
SYNE1Q8NF91 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 CU639417.3-201ENST00000624240 1404 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE1Q8NF91 ANKRD19P-201ENST00000338192 862 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC5□□□□□ -1.61
SYNE1Q8NF91 HNRNPA3P1-201ENST00000401429 1139 ntBASIC5□□□□□ -1.61
SYNE1Q8NF91 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC5□□□□□ -1.61
SYNE1Q8NF91 HNRNPA3P5-201ENST00000455201 833 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms