Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC082651.2-201ENST00000496833 166 ntBASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 HAUS1P1-201ENST00000505275 832 ntBASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC114322.1-201ENST00000506771 926 ntBASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 RN7SL819P-201ENST00000581896 270 ntBASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AC106730.3-201ENST00000624568 641 ntBASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFCAB3Q8N7B9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 RPS3AP29-201ENST00000437728 769 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AC114495.2-201ENST00000452686 437 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AL022319.1-201ENST00000458183 1167 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AP003041.2-201ENST00000525666 1180 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 RFPL4AP1-201ENST00000530883 850 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AL162390.1-201ENST00000622201 1246 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AC006963.1-201ENST00000624003 1052 ntBASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFCAB3Q8N7B9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms