Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AC123567.1-201ENST00000548294 1261 ntBASIC16.3■□□□□ 0.2
PGBD3Q8N328 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PGBD3Q8N328 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD3Q8N328 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 SPDYE17-201ENST00000412399 783 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 TIMM17BP1-201ENST00000545713 516 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC023310.3-201ENST00000557027 670 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 RAB43P1-201ENST00000561790 589 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC100756.1-201ENST00000562736 682 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC138749.3-201ENST00000567691 622 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC116165.1-201ENST00000611806 668 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 AC018695.7-201ENST00000624587 2492 ntBASIC16.29■□□□□ 0.2
PGBD3Q8N328 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD3Q8N328 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PGBD3Q8N328 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 TTTY23B-201ENST00000442790 549 ntBASIC16.28■□□□□ 0.2
PGBD3Q8N328 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 KRT17P8-201ENST00000540749 863 ntBASIC16.28■□□□□ 0.2
PGBD3Q8N328 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.28■□□□□ 0.2
PGBD3Q8N328 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PGBD3Q8N328 PCGF3-213ENST00000620529 1899 ntBASIC16.28■□□□□ 0.2
PGBD3Q8N328 PKD1P5-201ENST00000532415 10291 ntBASIC16.28■□□□□ 0.2
PGBD3Q8N328 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms