Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PROM2Q8N271 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.21■□□□□ 0.83
PROM2Q8N271 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM2Q8N271 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PROM2Q8N271 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM2Q8N271 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM2Q8N271 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM2Q8N271 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 LINC01144-201ENST00000626198 1710 ntBASIC20.2■□□□□ 0.82
PROM2Q8N271 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC20.2■□□□□ 0.82
PROM2Q8N271 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM2Q8N271 CNN2P10-201ENST00000443067 918 ntBASIC20.2■□□□□ 0.82
PROM2Q8N271 AL133466.1-201ENST00000447582 150 ntBASIC20.2■□□□□ 0.82
PROM2Q8N271 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM2Q8N271 RN7SL774P-201ENST00000577467 290 ntBASIC20.2■□□□□ 0.82
PROM2Q8N271 MIR3147-201ENST00000577811 66 ntBASIC20.2■□□□□ 0.82
PROM2Q8N271 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.2■□□□□ 0.82
PROM2Q8N271 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
PROM2Q8N271 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM2Q8N271 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM2Q8N271 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AL603756.1-201ENST00000606511 2163 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 AC067852.2-201ENST00000590513 2313 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 AC114501.1-201ENST00000445949 172 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 EEF1DP6-201ENST00000449232 372 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 AC104784.1-201ENST00000473096 294 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.19■□□□□ 0.82
PROM2Q8N271 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AP002490.2-201ENST00000524791 560 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PROM2Q8N271 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.19■□□□□ 0.82
PROM2Q8N271 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PROM2Q8N271 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AC108359.1-201ENST00000616451 1211 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PROM2Q8N271 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PROM2Q8N271 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.19■□□□□ 0.82
PROM2Q8N271 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PROM2Q8N271 AL023775.1-201ENST00000454907 1746 ntBASIC20.19■□□□□ 0.82
PROM2Q8N271 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PROM2Q8N271 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.18■□□□□ 0.82
PROM2Q8N271 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
PROM2Q8N271 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.18■□□□□ 0.82
PROM2Q8N271 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.18■□□□□ 0.82
PROM2Q8N271 MIR769-201ENST00000390225 118 ntBASIC20.18■□□□□ 0.82
PROM2Q8N271 AC136604.1-201ENST00000418535 575 ntBASIC20.18■□□□□ 0.82
PROM2Q8N271 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.18■□□□□ 0.82
PROM2Q8N271 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PROM2Q8N271 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.18■□□□□ 0.82
PROM2Q8N271 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 AC015910.1-201ENST00000579400 975 ntBASIC20.18■□□□□ 0.82
PROM2Q8N271 MIR4750-201ENST00000584564 56 ntBASIC20.18■□□□□ 0.82
PROM2Q8N271 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.18■□□□□ 0.82
PROM2Q8N271 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.18■□□□□ 0.82
PROM2Q8N271 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PROM2Q8N271 AC006480.2-201ENST00000609770 1337 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms