Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC83Q8IWF9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC83Q8IWF9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC83Q8IWF9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC83Q8IWF9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 MIR940-201ENST00000401276 94 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 TFAMP1-201ENST00000412727 736 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AC098859.1-201ENST00000502915 1238 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AC105233.2-201ENST00000523697 349 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AF228730.5-201ENST00000530288 346 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 AC092902.6-201ENST00000641783 218 ntBASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC83Q8IWF9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC83Q8IWF9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AC026396.1-201ENST00000419388 421 ntBASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 ADH5P3-201ENST00000433842 1137 ntBASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AKAP8P1-201ENST00000434743 1349 ntBASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms