Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AL353779.1-201ENST00000434793 351 ntBASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 HIST3H2BA-201ENST00000436555 524 ntBASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AC005225.4-201ENST00000557330 545 ntBASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 EEF1DP4-201ENST00000446006 880 ntBASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 AC025048.6-201ENST00000634326 1161 ntBASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 AL358472.5-202ENST00000641448 1267 ntBASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3F3CQ6NXT2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 REXO1L8P-201ENST00000604378 1897 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 AGGF1P2-201ENST00000426656 2106 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 LINC02199-201ENST00000506655 2702 ntBASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3F3CQ6NXT2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms