Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC023310.3-201ENST00000557027 670 ntBASIC18.38■□□□□ 0.53
USH1GQ495M9 AC100756.1-201ENST00000562736 682 ntBASIC18.38■□□□□ 0.53
USH1GQ495M9 AC138749.3-201ENST00000567691 622 ntBASIC18.38■□□□□ 0.53
USH1GQ495M9 AC239800.4-201ENST00000603712 296 ntBASIC18.38■□□□□ 0.53
USH1GQ495M9 AC116165.1-201ENST00000611806 668 ntBASIC18.38■□□□□ 0.53
USH1GQ495M9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USH1GQ495M9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
USH1GQ495M9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.38■□□□□ 0.53
USH1GQ495M9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USH1GQ495M9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.38■□□□□ 0.53
USH1GQ495M9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1GQ495M9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USH1GQ495M9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
USH1GQ495M9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 AL596087.1-201ENST00000400979 1969 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.37■□□□□ 0.53
USH1GQ495M9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 DFFBP1-201ENST00000433250 979 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 AL353779.1-201ENST00000434793 351 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.37■□□□□ 0.53
USH1GQ495M9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
USH1GQ495M9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 AC140912.1-201ENST00000577171 1054 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.37■□□□□ 0.53
USH1GQ495M9 CHCHD2P3-201ENST00000603038 451 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 LINC01115-203ENST00000606068 577 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.37■□□□□ 0.53
USH1GQ495M9 AP001282.1-201ENST00000531301 1499 ntBASIC18.37■□□□□ 0.53
USH1GQ495M9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
USH1GQ495M9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1GQ495M9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USH1GQ495M9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.36■□□□□ 0.53
USH1GQ495M9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 AC093004.1-201ENST00000508850 424 ntBASIC18.36■□□□□ 0.53
USH1GQ495M9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.36■□□□□ 0.53
USH1GQ495M9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.36■□□□□ 0.53
USH1GQ495M9 AL596325.1-201ENST00000563991 1082 ntBASIC18.36■□□□□ 0.53
USH1GQ495M9 TP53TG3HP-202ENST00000569755 579 ntBASIC18.36■□□□□ 0.53
USH1GQ495M9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
USH1GQ495M9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USH1GQ495M9 LINC02199-201ENST00000506655 2702 ntBASIC18.36■□□□□ 0.53
USH1GQ495M9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.36■□□□□ 0.53
USH1GQ495M9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms