Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 AC092127.1-201ENST00000567093 3455 ntBASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 HAUS4P1-201ENST00000406739 1145 ntBASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 AC091304.2-201ENST00000564639 760 ntBASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 AF228730.7-201ENST00000641842 219 ntBASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.4□□□□□ -0.27
ANKRD55Q3KP44 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ANKRD55Q3KP44 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.4□□□□□ -0.27
ANKRD55Q3KP44 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AC007686.3-201ENST00000619017 3487 ntBASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AL022326.1-202ENST00000641533 845 ntBASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 AC232323.1-201ENST00000540724 2099 ntBASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 REXO1L5P-201ENST00000622260 2098 ntBASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ANKRD55Q3KP44 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms