Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 AC009407.1-201ENST00000568958 598 ntBASIC20.79■□□□□ 0.92
CCDC27Q2M243 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 RPL13P2-201ENST00000440687 659 ntBASIC20.78■□□□□ 0.92
CCDC27Q2M243 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AC027796.2-201ENST00000575326 344 ntBASIC20.78■□□□□ 0.92
CCDC27Q2M243 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC27Q2M243 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC27Q2M243 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 SDHAP3-202ENST00000515467 728 ntBASIC20.77■□□□□ 0.92
CCDC27Q2M243 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC27Q2M243 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC27Q2M243 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC27Q2M243 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC27Q2M243 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC27Q2M243 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC27Q2M243 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC27Q2M243 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC27Q2M243 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC27Q2M243 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms