Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 INTS4P2-202ENST00000614726 2019 ntBASIC19.07■□□□□ 0.64
PDS5AQ29RF7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 AC244107.1-201ENST00000442033 332 ntBASIC19.06■□□□□ 0.64
PDS5AQ29RF7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 CYP2T1P-202ENST00000641596 2535 ntBASIC19.06■□□□□ 0.64
PDS5AQ29RF7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDS5AQ29RF7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 AL049840.4-201ENST00000602422 811 ntBASIC19.05■□□□□ 0.64
PDS5AQ29RF7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDS5AQ29RF7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 ENPP7P5-201ENST00000541031 1031 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC015910.1-201ENST00000579400 975 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC133539.2-201ENST00000604757 467 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms