Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 BNIP3P1-202ENST00000550043 1585 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH17Q12864 AC004987.2-201ENST00000395959 1148 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 RPS8P6-201ENST00000426177 609 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH17Q12864 SLC25A39P2-201ENST00000537614 270 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 AC055717.3-201ENST00000622967 595 ntBASIC16.23■□□□□ 0.19
CDH17Q12864 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CDH17Q12864 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
CDH17Q12864 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH17Q12864 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH17Q12864 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH17Q12864 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH17Q12864 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH17Q12864 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH17Q12864 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 AC105339.1-204ENST00000636249 355 ntBASIC16.22■□□□□ 0.19
CDH17Q12864 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH17Q12864 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH17Q12864 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH17Q12864 AP3S2-216ENST00000617003 1561 ntBASIC16.21■□□□□ 0.19
CDH17Q12864 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH17Q12864 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH17Q12864 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH17Q12864 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.21■□□□□ 0.19
CDH17Q12864 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH17Q12864 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 AP000347.1-202ENST00000435868 847 ntBASIC16.21■□□□□ 0.19
CDH17Q12864 AL139010.1-201ENST00000454878 894 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms