Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TUBA4AP68366 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 AC012640.2-201ENST00000561606 901 ntBASIC15.16■□□□□ 0.02
TUBA4AP68366 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.16■□□□□ 0.02
TUBA4AP68366 AP001005.1-201ENST00000571755 1248 ntBASIC15.16■□□□□ 0.02
TUBA4AP68366 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA4AP68366 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 HLA-A-201ENST00000376802 1334 ntBASIC15.16■□□□□ 0.02
TUBA4AP68366 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TUBA4AP68366 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TUBA4AP68366 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 LINC00982-205ENST00000420957 435 ntBASIC15.15■□□□□ 0.02
TUBA4AP68366 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBA4AP68366 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.15■□□□□ 0.02
TUBA4AP68366 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBA4AP68366 AL662844.1-201ENST00000546340 181 ntBASIC15.15■□□□□ 0.02
TUBA4AP68366 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 AC126755.1-201ENST00000525846 6405 ntBASIC15.15■□□□□ 0.02
TUBA4AP68366 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
TUBA4AP68366 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA4AP68366 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA4AP68366 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TUBA4AP68366 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA4AP68366 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA4AP68366 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA4AP68366 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA4AP68366 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA4AP68366 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA4AP68366 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA4AP68366 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA4AP68366 PRYP5-201ENST00000451909 266 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms