Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 AC092183.1-201ENST00000469884 875 ntBASIC17.38■□□□□ 0.37
SNRPFP62306 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.38■□□□□ 0.37
SNRPFP62306 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNRPFP62306 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.38■□□□□ 0.37
SNRPFP62306 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.38■□□□□ 0.37
SNRPFP62306 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.38■□□□□ 0.37
SNRPFP62306 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 Z97205.2-201ENST00000564697 1639 ntBASIC17.38■□□□□ 0.37
SNRPFP62306 AC087499.5-201ENST00000452760 1342 ntBASIC17.38■□□□□ 0.37
SNRPFP62306 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNRPFP62306 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.38■□□□□ 0.37
SNRPFP62306 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRPFP62306 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SNRPFP62306 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 AC018892.3-201ENST00000623986 2499 ntBASIC17.37■□□□□ 0.37
SNRPFP62306 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 AC097493.3-201ENST00000509725 367 ntBASIC17.37■□□□□ 0.37
SNRPFP62306 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRPFP62306 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRPFP62306 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRPFP62306 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPFP62306 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPFP62306 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRPFP62306 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.36■□□□□ 0.37
SNRPFP62306 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 AC027369.6-201ENST00000525520 931 ntBASIC17.36■□□□□ 0.37
SNRPFP62306 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.36■□□□□ 0.37
SNRPFP62306 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRPFP62306 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms