Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2D3P61077 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 AC093909.1-201ENST00000504731 1122 ntBASIC11.49□□□□□ -0.57
UBE2D3P61077 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.49□□□□□ -0.57
UBE2D3P61077 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2D3P61077 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
UBE2D3P61077 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2D3P61077 AL031008.1-201ENST00000619963 541 ntBASIC11.49□□□□□ -0.57
UBE2D3P61077 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
UBE2D3P61077 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D3P61077 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D3P61077 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D3P61077 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.48□□□□□ -0.57
UBE2D3P61077 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 IGLL3P-201ENST00000412472 434 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 AC009947.1-201ENST00000444350 727 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 UNC93B6-202ENST00000528242 690 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.48□□□□□ -0.57
UBE2D3P61077 AP002469.2-201ENST00000531724 424 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 AC109635.5-201ENST00000533593 962 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
UBE2D3P61077 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2D3P61077 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 AL049840.3-201ENST00000602669 611 ntBASIC11.48□□□□□ -0.57
UBE2D3P61077 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms