Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC42P60953 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
CDC42P60953 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 AC021097.1-201ENST00000607902 574 ntBASIC14.75□□□□□ -0.05
CDC42P60953 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDC42P60953 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC42P60953 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 LINC01101-201ENST00000622953 1884 ntBASIC14.75□□□□□ -0.05
CDC42P60953 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CDC42P60953 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42P60953 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC42P60953 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC42P60953 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 AC090616.6-203ENST00000579186 1945 ntBASIC14.74□□□□□ -0.05
CDC42P60953 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 PCED1CP-201ENST00000419887 785 ntBASIC14.74□□□□□ -0.05
CDC42P60953 AC245100.5-201ENST00000452108 331 ntBASIC14.74□□□□□ -0.05
CDC42P60953 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.74□□□□□ -0.05
CDC42P60953 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 MTDHP3-201ENST00000594186 672 ntBASIC14.74□□□□□ -0.05
CDC42P60953 MTDHP4-201ENST00000600287 670 ntBASIC14.74□□□□□ -0.05
CDC42P60953 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CDC42P60953 AC138894.3-201ENST00000603787 634 ntBASIC14.74□□□□□ -0.05
CDC42P60953 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.74□□□□□ -0.05
CDC42P60953 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDC42P60953 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42P60953 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms