Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RHBDL3P58872 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 AC079328.2-201ENST00000561241 3354 ntBASIC18.78■□□□□ 0.6
RHBDL3P58872 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RHBDL3P58872 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.78■□□□□ 0.6
RHBDL3P58872 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.78■□□□□ 0.6
RHBDL3P58872 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.78■□□□□ 0.6
RHBDL3P58872 KRT18P43-201ENST00000469825 1281 ntBASIC18.78■□□□□ 0.6
RHBDL3P58872 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.78■□□□□ 0.6
RHBDL3P58872 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 ENPP7P5-201ENST00000541031 1031 ntBASIC18.78■□□□□ 0.6
RHBDL3P58872 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.78■□□□□ 0.6
RHBDL3P58872 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC069224.1-201ENST00000566372 1715 ntBASIC18.77■□□□□ 0.6
RHBDL3P58872 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.77■□□□□ 0.6
RHBDL3P58872 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.77■□□□□ 0.6
RHBDL3P58872 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.77■□□□□ 0.6
RHBDL3P58872 COX11-210ENST00000639671 696 ntBASIC18.77■□□□□ 0.6
RHBDL3P58872 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RHBDL3P58872 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RHBDL3P58872 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.77■□□□□ 0.6
RHBDL3P58872 AC018695.7-201ENST00000624587 2492 ntBASIC18.77■□□□□ 0.59
RHBDL3P58872 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.77■□□□□ 0.59
RHBDL3P58872 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDL3P58872 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDL3P58872 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RHBDL3P58872 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.76■□□□□ 0.59
RHBDL3P58872 HLA-V-201ENST00000429037 534 ntBASIC18.76■□□□□ 0.59
RHBDL3P58872 AC234783.1-201ENST00000441761 496 ntBASIC18.76■□□□□ 0.59
RHBDL3P58872 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.76■□□□□ 0.59
RHBDL3P58872 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.76■□□□□ 0.59
RHBDL3P58872 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.76■□□□□ 0.59
RHBDL3P58872 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 TDH-203ENST00000531764 1110 ntBASIC18.76■□□□□ 0.59
RHBDL3P58872 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.76■□□□□ 0.59
RHBDL3P58872 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDL3P58872 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.76■□□□□ 0.59
RHBDL3P58872 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDL3P58872 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 PCDH8P1-201ENST00000428983 2773 ntBASIC18.76■□□□□ 0.59
RHBDL3P58872 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDL3P58872 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 AC124067.4-201ENST00000519691 2379 ntBASIC18.76■□□□□ 0.59
RHBDL3P58872 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDL3P58872 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDL3P58872 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RHBDL3P58872 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHBDL3P58872 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RHBDL3P58872 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.75■□□□□ 0.59
RHBDL3P58872 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.75■□□□□ 0.59
RHBDL3P58872 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHBDL3P58872 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms