Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 SPDYE18-201ENST00000510091 1050 ntBASIC20.95■□□□□ 0.94
RIPK4P57078 AC008761.3-201ENST00000624803 892 ntBASIC20.95■□□□□ 0.94
RIPK4P57078 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPK4P57078 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.95■□□□□ 0.94
RIPK4P57078 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RIPK4P57078 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 BTBD7P1-201ENST00000447253 1453 ntBASIC20.94■□□□□ 0.94
RIPK4P57078 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RIPK4P57078 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 AC114501.2-201ENST00000439631 535 ntBASIC20.94■□□□□ 0.94
RIPK4P57078 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.94■□□□□ 0.94
RIPK4P57078 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.94■□□□□ 0.94
RIPK4P57078 AL450472.2-201ENST00000603663 1156 ntBASIC20.94■□□□□ 0.94
RIPK4P57078 AC004790.1-201ENST00000612686 536 ntBASIC20.94■□□□□ 0.94
RIPK4P57078 AC004461.2-201ENST00000629517 803 ntBASIC20.94■□□□□ 0.94
RIPK4P57078 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.94■□□□□ 0.94
RIPK4P57078 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.94■□□□□ 0.94
RIPK4P57078 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK4P57078 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIPK4P57078 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.93■□□□□ 0.94
RIPK4P57078 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 FAM207CP-201ENST00000443486 507 ntBASIC20.93■□□□□ 0.94
RIPK4P57078 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.93■□□□□ 0.94
RIPK4P57078 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.93■□□□□ 0.94
RIPK4P57078 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.93■□□□□ 0.94
RIPK4P57078 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RIPK4P57078 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 AL162727.3-201ENST00000635661 2787 ntBASIC20.93■□□□□ 0.94
RIPK4P57078 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RIPK4P57078 Z97205.2-201ENST00000564697 1639 ntBASIC20.93■□□□□ 0.94
RIPK4P57078 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
RIPK4P57078 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK4P57078 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RIPK4P57078 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.92■□□□□ 0.94
RIPK4P57078 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms