Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN6P56747 AC092933.1-201ENST00000393644 945 ntBASIC15.36■□□□□ 0.05
CLDN6P56747 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN6P56747 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN6P56747 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN6P56747 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.36■□□□□ 0.05
CLDN6P56747 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN6P56747 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN6P56747 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN6P56747 AC020907.1-201ENST00000616460 1350 ntBASIC15.36■□□□□ 0.05
CLDN6P56747 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN6P56747 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.35■□□□□ 0.05
CLDN6P56747 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 MSTO2P-201ENST00000314835 1709 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN6P56747 AZGP1P1-201ENST00000411909 902 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN6P56747 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN6P56747 AC036164.1-201ENST00000570544 333 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CLDN6P56747 AC133539.2-201ENST00000604757 467 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 AL139011.1-202ENST00000642063 584 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 PCGF3-213ENST00000620529 1899 ntBASIC15.35■□□□□ 0.05
CLDN6P56747 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN6P56747 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN6P56747 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN6P56747 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 UBALD1-205ENST00000590891 2641 ntBASIC15.34■□□□□ 0.05
CLDN6P56747 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN6P56747 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN6P56747 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN6P56747 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms