Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH13P55290 AC245100.5-201ENST00000452108 331 ntBASIC15.75■□□□□ 0.11
CDH13P55290 AC074386.1-202ENST00000463561 864 ntBASIC15.75■□□□□ 0.11
CDH13P55290 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.75■□□□□ 0.11
CDH13P55290 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH13P55290 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDH13P55290 AC011477.6-201ENST00000604980 1927 ntBASIC15.74■□□□□ 0.11
CDH13P55290 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 AC020658.6-201ENST00000623564 1870 ntBASIC15.74■□□□□ 0.11
CDH13P55290 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 AC092127.1-201ENST00000567093 3455 ntBASIC15.74■□□□□ 0.11
CDH13P55290 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH13P55290 GPX1P2-201ENST00000429271 606 ntBASIC15.74■□□□□ 0.11
CDH13P55290 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 AL138918.1-201ENST00000568306 659 ntBASIC15.74■□□□□ 0.11
CDH13P55290 AP002472.1-201ENST00000577490 586 ntBASIC15.74■□□□□ 0.11
CDH13P55290 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH13P55290 AC068137.2-201ENST00000605408 478 ntBASIC15.74■□□□□ 0.11
CDH13P55290 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 AL161645.1-201ENST00000622716 1255 ntBASIC15.74■□□□□ 0.11
CDH13P55290 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.74■□□□□ 0.11
CDH13P55290 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CDH13P55290 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH13P55290 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH13P55290 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 IL9RP2-201ENST00000423948 1312 ntBASIC15.73■□□□□ 0.11
CDH13P55290 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms