Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 BNIP3P1-202ENST00000550043 1585 ntBASIC17.74■□□□□ 0.43
LBX1P52954 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 MRPL37P1-201ENST00000592451 1337 ntBASIC17.73■□□□□ 0.43
LBX1P52954 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.73■□□□□ 0.43
LBX1P52954 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 RN7SKP214-201ENST00000364208 315 ntBASIC17.73■□□□□ 0.43
LBX1P52954 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.73■□□□□ 0.43
LBX1P52954 TUBB8P8-201ENST00000458717 1058 ntBASIC17.73■□□□□ 0.43
LBX1P52954 AC026410.1-201ENST00000507366 1101 ntBASIC17.73■□□□□ 0.43
LBX1P52954 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.73■□□□□ 0.43
LBX1P52954 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.73■□□□□ 0.43
LBX1P52954 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LBX1P52954 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LBX1P52954 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.73■□□□□ 0.43
LBX1P52954 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.72■□□□□ 0.43
LBX1P52954 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LBX1P52954 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 PCDHB17P-201ENST00000539533 2393 ntBASIC17.72■□□□□ 0.43
LBX1P52954 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 AL354751.1-201ENST00000412768 1863 ntBASIC17.72■□□□□ 0.43
LBX1P52954 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.72■□□□□ 0.43
LBX1P52954 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.72■□□□□ 0.43
LBX1P52954 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.72■□□□□ 0.43
LBX1P52954 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 PUDPP3-201ENST00000445368 636 ntBASIC17.72■□□□□ 0.43
LBX1P52954 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.72■□□□□ 0.43
LBX1P52954 RPL17P45-201ENST00000586289 509 ntBASIC17.72■□□□□ 0.43
LBX1P52954 AC011247.3-201ENST00000603297 438 ntBASIC17.72■□□□□ 0.43
LBX1P52954 AC090164.2-201ENST00000611487 516 ntBASIC17.72■□□□□ 0.43
LBX1P52954 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.72■□□□□ 0.43
LBX1P52954 MIR6816-201ENST00000620368 66 ntBASIC17.72■□□□□ 0.43
LBX1P52954 LINC00431-202ENST00000636375 159 ntBASIC17.72■□□□□ 0.43
LBX1P52954 NAP1L6-202ENST00000641404 1222 ntBASIC17.72■□□□□ 0.43
LBX1P52954 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LBX1P52954 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBX1P52954 GGT4P-201ENST00000623672 1708 ntBASIC17.72■□□□□ 0.43
LBX1P52954 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LBX1P52954 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LBX1P52954 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
LBX1P52954 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
LBX1P52954 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.71■□□□□ 0.43
LBX1P52954 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.71■□□□□ 0.43
LBX1P52954 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 PSMD4P1-201ENST00000433951 1109 ntBASIC17.71■□□□□ 0.43
LBX1P52954 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.71■□□□□ 0.43
LBX1P52954 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBX1P52954 CHMP1AP1-201ENST00000445563 662 ntBASIC17.71■□□□□ 0.43
LBX1P52954 AC114812.1-204ENST00000449669 728 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms