Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HCFC1P51610 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 SOCS2P1-201ENST00000417727 557 ntBASIC13.9□□□□□ -0.18
HCFC1P51610 KRT43P-201ENST00000434019 910 ntBASIC13.9□□□□□ -0.18
HCFC1P51610 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 KLF2P4-201ENST00000451959 1225 ntBASIC13.9□□□□□ -0.18
HCFC1P51610 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.9□□□□□ -0.18
HCFC1P51610 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HCFC1P51610 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
HCFC1P51610 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 AL691432.1-201ENST00000596308 1422 ntBASIC13.89□□□□□ -0.19
HCFC1P51610 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HCFC1P51610 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.89□□□□□ -0.19
HCFC1P51610 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.89□□□□□ -0.19
HCFC1P51610 RN7SL560P-201ENST00000577943 264 ntBASIC13.89□□□□□ -0.19
HCFC1P51610 RN7SL219P-201ENST00000582872 296 ntBASIC13.89□□□□□ -0.19
HCFC1P51610 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.89□□□□□ -0.19
HCFC1P51610 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 AC006538.1-201ENST00000567905 1585 ntBASIC13.89□□□□□ -0.19
HCFC1P51610 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.89□□□□□ -0.19
HCFC1P51610 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCFC1P51610 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.89□□□□□ -0.19
HCFC1P51610 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HCFC1P51610 MIR6869-201ENST00000619434 62 ntBASIC13.88□□□□□ -0.19
HCFC1P51610 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.88□□□□□ -0.19
HCFC1P51610 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
HCFC1P51610 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HCFC1P51610 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms