Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 AC027307.2-201ENST00000591252 911 ntBASIC15□□□□□ -0.01
RNF144AP50876 SPDYE10P-202ENST00000612005 668 ntBASIC15□□□□□ -0.01
RNF144AP50876 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 SPDYE8P-202ENST00000612377 668 ntBASIC15□□□□□ -0.01
RNF144AP50876 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 FOXO1B-201ENST00000504678 1527 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 AL589702.1-201ENST00000641229 1509 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.99□□□□□ -0.01
RNF144AP50876 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 BX842568.4-201ENST00000421222 227 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 SPCS2P4-201ENST00000436160 681 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.99□□□□□ -0.01
RNF144AP50876 AC079140.1-201ENST00000508039 487 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 AC243562.1-201ENST00000560672 389 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 MIR4469-201ENST00000583919 79 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RNF144AP50876 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 C20orf181-201ENST00000623918 480 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 AC092384.3-202ENST00000564646 2873 ntBASIC14.99□□□□□ -0.01
RNF144AP50876 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF144AP50876 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF144AP50876 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RNF144AP50876 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 UXT-AS1-201ENST00000590504 1525 ntBASIC14.98□□□□□ -0.01
RNF144AP50876 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF144AP50876 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms